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The ALTENS module is accessible from the Beta section of the main menu.
The purpose of the module is calculate ... .
This example calculates
run name user defined name of folder that will contain the results.
reference pdb PDB file with naming information and coordinates of the starting structure.
input filename (dcd or pdb): DCD or PDB file with coordinates that will be used to calculate polar solvation energies.
Results are written to a new directory within the given "run name" as noted in the output.
Several files are generated and saved to the "run name"/altens directory.
run_0/apbs/ten_mer.pdb -- the reference PDB file run_0/apbs/apbs_00001.pdb -- the input PDB file r
Several plots are ...
Currently, users cannot submit their own APBS input files to access other functionality of the APBS-PDB2PQR package.
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