Monomer Monte Carlo Performs molecular Monte Carlo simulation of single chain protein and nucleic acids.
Complex Monte Carlo Performs molecular Monte Carlo simulation of multiple chain protein and single chain nucleic acids.
Torsion Angle Monte Carlo Performs molecular Monte Carlo simulation of proteins, single stranded nucleic acids, double stranded nucleic acids, some carbohydrates and selected polymers. BETA
Energy Minimization Performs energy minimization and molecular dynamics simulation of input structures.
Torsion Angle MD Performs torsion-angle molecular dynamics of proteins, nucleic acids, carbohydrates and their complexes of input structures.
ProDy Generates structures by from trajectories derived from normal mode analysis of input structure.
Docking Generates structures by performing molecular docking based on surface similarity. ALPHA
Two-Body Grid Generates structures by sampling by rigid body displacements.
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